Decompress a Gzip archive in Java

I'm trying to decompress about 8000 files in gzip format in Java. My first try was to use GZIPInputStream but the performance was awful. Anyone know any alternative to decompress gzip archives? I tried ZipInputStream but it's not recognizing the gzip format. Thank you in advance.
Are you decompressing the files to be processed by the java app or are they being written out to disk?

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